Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891790.1_cds_XP_016446661.1_41497
CDS Infomation

[gene=LOC107771732] [db_xref=GeneID:107771732] [protein=transcription factor TGA2-like isoform X2] [protein_id=XP_016446661.1] [location=complement(join(31276..31363,31491..31633,33399..33620,33706..33977,34738..34786,34896..34973,35270..35329,35427..35471,36215..36454,36601..36686,37049..37137,37261..37391))] [gbkey=CDS]
Sequence

ATGGCAAGTGAAGGAATTGGAGAGACTGGTTTAACAAACTCAGGACCATCAAATCTCCAT
AATATGCCTTATGCCGTTTTTAGGGGGCTAAATCCTGCTAGCACAAGCTTCATGTATCAT
TCTACTCCCAATAATCAAGAAGGATCTTTTGATTTTGGAGAGCTAGAAGAAGCTTTTGCA
CTACAAGGATTTAAGATCAATAATGATGAAGCTAAAGCATCTTTATATGCAGCAGCCACA
GGGAAGCCTGCTGCAACTCTGGATATGTTCCCTTCTTGGCCTATGAGATTCCAAGAGACC
CCTAGAGAAAACTCAAAATCAAGAGAAGAAGAGATCAGTACAGATTCAGGTTCACTTTCA
AGTAGAGCTCAAGGCCATTTGGAACCAGAATCTCCTATCAGTAGAAAAGCATCCTCAGAA
CAAAATCAACTTCAGATAACACAACAACAACAGCAGCAGCAGCTTCATCAAGAAATGTCT
AGTGATAATAATCCAAGAATTGAAAATTTACAAACTGAACTAGCTTCAAAGCCCAACACT
GAAAAGAGAAAGGGTGCTGGTTCAACCTCAGAGAGGATGGCTGATCCTAAGACATTGAGA
CGTTTAGCACAAAATAGAGAAGCAGCAAAGAAAAGCAGGCTAAGAAAAAAGGCTTATGTA
CAACAGTTAGAATCAAGCAGGATAAGACTTTCTCAGCTAGAGCAAGAACTTCAACGGGCT
AGATCTCAGGGGGTTTTCTTGGGAGGAGGTACTTCTGCTGGTGCCAACATCAGCTCTGGT
GCTGCATTATTTGACATGGAATATTCAAGGTGGTTGGATGATGATCACAGGCACATGTCG
GAGCTCCGAACTGCATTACAAACACATTTATCAGATGGTGATCTTAGGTTAATAGTTGAT
GGATATATAGCTCATTACGATGAAATTTTCAGCCTCAAGGGTGTGGCAGCAAAATGTGAT
GTATTTCACTTAATTACTGGAATGTGGACAACTCCAGCTGAACGCTGCTTCCTTTGGATG
GGTGGTTTTAGGCCATCTGAACTTATTAAGATGTTGATTGGACAATTGGACCCTTTAACA
GAGCAGCAACTTATGGGAATTTATAGCCTCCAGCAATCTTCCCAACAAGCAGAGGAAGCC
CTTTCCCAGGGATTGGAACAATTGCAACAATCTTTAATTAATACTGTTGCAAGTGGTTCT
ATCAATGATGGGATGCATCATATGGCTCTTGCATTGGGCAAGCTTTCCAATCTTGAAGGA
TTTGTTCGTCAGGCCGATAATTTGAGACAACAAACGTTGCATCAGTTACACAGAATATTG
ACAGTTAGGCAAGCAGCCCGATGTTTCTTGGTGATTGGGGAGTATTATGGTCGATTACGA
GCCTTAAGTTCTCTATGGTTATCTCGTCCACGAGAGACACTGATCCCAGATGATAGTTCT
TGTCAAACAACAACGGAGTTACAAATGGTACGCTCCTCTCAGAACCACTTCTCAAATTTC
TGA

Peptide Sequence

PEP ID

XP_016446661.1
PEP Infomation

PREDICTED: transcription factor TGA2-like isoform X2 [Nicotiana tabacum]
Sequence

MASEGIGETGLTNSGPSNLHNMPYAVFRGLNPASTSFMYHSTPNNQEGSFDFGELEEAFA
LQGFKINNDEAKASLYAAATGKPAATLDMFPSWPMRFQETPRENSKSREEEISTDSGSLS
SRAQGHLEPESPISRKASSEQNQLQITQQQQQQQLHQEMSSDNNPRIENLQTELASKPNT
EKRKGAGSTSERMADPKTLRRLAQNREAAKKSRLRKKAYVQQLESSRIRLSQLEQELQRA
RSQGVFLGGGTSAGANISSGAALFDMEYSRWLDDDHRHMSELRTALQTHLSDGDLRLIVD
GYIAHYDEIFSLKGVAAKCDVFHLITGMWTTPAERCFLWMGGFRPSELIKMLIGQLDPLT
EQQLMGIYSLQQSSQQAEEALSQGLEQLQQSLINTVASGSINDGMHHMALALGKLSNLEG
FVRQADNLRQQTLHQLHRILTVRQAARCFLVIGEYYGRLRALSSLWLSRPRETLIPDDSS
CQTTTELQMVRSSQNHFSNF

Transcript Sequence

Gene sequence data has not been registered.